Da Capo 2 is a continuation of the original game. The action takes place 50 years later. The main character of the story is a young man named Yoshiyuki Sakurai. He studies at Kazemi School. Sisters Otome and Yume Asakura live next door. Accordingly, they begin to be friends and spend time together. The plot begins with the fact that Sakura Yoshino managed to grow a magic tree. It is able to make secret wishes come true. And it does not matter whether they are made out of kindness or with evil intent. Accordingly, significant problems have arisen. Young people need to deal with a non-standard situation, save the population from an impending disaster. At the same time, they build relationships – love or friendship.

The events in Da Capo 2 develop through dialogues. The user reads phrases and lines, and then selects the answers provided. This decision determines further progress along the storyline and the end of the story. There is also a map of the area. You can move around it, visiting various places and locations. There is a high probability of meeting secondary characters. This can lead to a radical change in what is happening. Interaction with objects also affects the future. For example, if you forget to set an alarm clock and sleep through a meeting, the development of the story will change. The story is depicted in anime style, in the form of drawn pictures.